Monday, May 28, 2007
The wave gothic festival was in Leipzig this weekend. I'm not sure, but I believe it is the biggest meeting of its kind in Europe. Long story short, there were a lot of interesting people in the city. Check out some pictures here. Ines' cousin is a participant in this gothic culture and we went with her to one of these gothic parties this weekend. It was rather cool...music you would almost never hear in a club, lots of interesting people to look at. Though there were many ridiculous outfits, the most humorous thing I observed at this party was in the bathroom. It was perhaps the first time I observed competition for mirror space in a men's bathroom. The gothic guys had to check whether their black lipstick and eyeliner still looked ok. Maybe we can think of this as a step toward gender equality...
Thursday, May 24, 2007
Disney Movies and German Bureaucracy
I remember that in my primary education (and beyond) tolerance and appreciation for cultural diversity were major topics of societal concern. The main points were and are obvious. Don't categorize people. Do be racist. Everyone should have an equal shot. Stereotypes are wrong. Now, if I take these lessons and apply them to my experiences in Germany, then I should be able to debunk many of the common, German stereotypes. Beer-drinking, sausage-eating, well-organized, unfriendly skinheads. I'm not actually gonna address any of these prejudices/exaggerations. Instead, I'm just using them to bring me in a roundabout, incoherent way to an absolutely true stereotype: the bureaucracy in Germany is extensive and intolerable. Today, I was at the immigration office. I had been there once before to ask about the documents I would need to produce to get permission to live in this country. After compiling this mass of documents, I returned to the office in the hopes of easily procuring a residence permit. The first step was to wait 3 hours before being able to talk to anyone (when I arrived they were in the 40s and I pulled number 129). Upon finally talking with someone, it turns out that the application is still not complete. Luckily, I can send the papers without actually waiting in the office again. However, I have to wait a few months before my application is actually processed, and when it is, that's another trip to the immigration office. If Ines didn't come and vouch for me, I'm certain it would have been much, much more difficult. While this doesn't seem so bad (perhaps such bureaucracy is only ruthlessly imposed on immigrants), I think such extensive paperwork is an endemic part of German society. Doctor visits, driver's licenses, work permits, housing contracts...they all seem painfully complex to me. Oh well, you just can't fight the system.
Onto the next, unrelated topic...a short story. Ines and I watched "Bend it like Beckham" on TV a few days ago. It's a Disney movie, so it has a 99% chance of having a predictable happy ending....and that's what happened. Anyways, during the happy climax, two lead characters are kissing, lovingly but not erotically, and rubbing their noses against one another's face. Ines turned to me and said "I want to do this with you". Almost simultaneously, perhaps as the word "want" was escaping her lips, I let out a magnificent sneeze (the hay fever has been nastly of late). As I wiped the snot from my nose, I turned to her and asked if she wanted to reconsider. All she could do was laugh. What is my point? Life is not like a Disney movie, but sometimes it can be funny anyways.
I remember that in my primary education (and beyond) tolerance and appreciation for cultural diversity were major topics of societal concern. The main points were and are obvious. Don't categorize people. Do be racist. Everyone should have an equal shot. Stereotypes are wrong. Now, if I take these lessons and apply them to my experiences in Germany, then I should be able to debunk many of the common, German stereotypes. Beer-drinking, sausage-eating, well-organized, unfriendly skinheads. I'm not actually gonna address any of these prejudices/exaggerations. Instead, I'm just using them to bring me in a roundabout, incoherent way to an absolutely true stereotype: the bureaucracy in Germany is extensive and intolerable. Today, I was at the immigration office. I had been there once before to ask about the documents I would need to produce to get permission to live in this country. After compiling this mass of documents, I returned to the office in the hopes of easily procuring a residence permit. The first step was to wait 3 hours before being able to talk to anyone (when I arrived they were in the 40s and I pulled number 129). Upon finally talking with someone, it turns out that the application is still not complete. Luckily, I can send the papers without actually waiting in the office again. However, I have to wait a few months before my application is actually processed, and when it is, that's another trip to the immigration office. If Ines didn't come and vouch for me, I'm certain it would have been much, much more difficult. While this doesn't seem so bad (perhaps such bureaucracy is only ruthlessly imposed on immigrants), I think such extensive paperwork is an endemic part of German society. Doctor visits, driver's licenses, work permits, housing contracts...they all seem painfully complex to me. Oh well, you just can't fight the system.
Onto the next, unrelated topic...a short story. Ines and I watched "Bend it like Beckham" on TV a few days ago. It's a Disney movie, so it has a 99% chance of having a predictable happy ending....and that's what happened. Anyways, during the happy climax, two lead characters are kissing, lovingly but not erotically, and rubbing their noses against one another's face. Ines turned to me and said "I want to do this with you". Almost simultaneously, perhaps as the word "want" was escaping her lips, I let out a magnificent sneeze (the hay fever has been nastly of late). As I wiped the snot from my nose, I turned to her and asked if she wanted to reconsider. All she could do was laugh. What is my point? Life is not like a Disney movie, but sometimes it can be funny anyways.
Sunday, May 20, 2007
If I were more creative I could come up with cool lyrics like this...
What are you gonna wear to the impending rapture? -Tub Ring
Spit shine your black clouds. -Blood Brothers
Roaring with whispers, tiny bunnies, those fucking bunnies. -HORSE the band
No prophet has ever been accepted in his own village. -Kaddisfly
Get up off this Wisconsin Death Trip. -Static-X
I was gonna write more, but some seemingly good ideas turn out to have limited substance, i.e. I can recall anything else as I sit here...
What are you gonna wear to the impending rapture? -Tub Ring
Spit shine your black clouds. -Blood Brothers
Roaring with whispers, tiny bunnies, those fucking bunnies. -HORSE the band
No prophet has ever been accepted in his own village. -Kaddisfly
Get up off this Wisconsin Death Trip. -Static-X
I was gonna write more, but some seemingly good ideas turn out to have limited substance, i.e. I can recall anything else as I sit here...
Thursday, May 17, 2007
Sunday, May 13, 2007
This should be interesting. I drank three biers earlier in the evening and now I'm enjoying a cocktail. It is some orange juice mixed with Mexican booze my sister gave me (a booze for average, poor Mexicans, i.e. something like tequilla but more likely to make you go blind). Anyways, I just spent the last 3+ hrs watching the eurovision song contest. For the amusement of visitors to this blog I will try to write a post about this event without pressing the backspace key. Starting now. Serbia won the event, tak,ign over the poisition from Lordi, last years winners form my adoptemd home land, Finalnd. (man this is terrible after one senctence). Me and everyone that was watching the event with me felt the song was rathger terrible. It wasn't pop, it wasn't rock , what wsa it? I don't know. But I do know that it wasn't too interesting or particularly beuatiful. Actually, Ines and I sent in a votr fro the Ukraine; theyre contestant was a drag quessn the played a eurotrash, 90s dance song (in german, actually). While it was also not a attravctive soneg we gound it more entertaining that the Servian dong. But as usual, our musical tastes are not matched byu the masses. Actually, this was the first time I wastched a full eurovision cong contest. but I imagine that most other ones alwao work like this. The best song doesn't win, but some unexpected song manages to attract the attendion to european voters. For example Loradi did this lats year. Theyre song was not good, but it was new and interasting, so pepole voted for them. While I didn't find the song from servia intersting , others must have, so they voted fro it. This lead s to the essential poroblem of understanding what people like and why.l I don't have this skill; I don't know what people like. What I kilke other people don't, so I wisely never pusued a jo in marketing. But after watching a eurovison contest in which artists try to make people form many different culttures ahappy, I can see how diffecult a job talent scouts have. Ok, at this point I feel that it is prudent to use the backspace button again. So what is the point of this post? Erasers are a necessary tool in writing a coherent post? What do people want in their pop music? Why can't marketing be a backup career for me? No. This post is simply to entertain. As the organizers of the eurovision song contest know, this is easier said than done.
Thursday, May 10, 2007

There's a lot of weird stuff out in nature. Here's an interesting example...ducks, yeah those boring, cosmopolitan waterfowl that old folks like to feed, have bizarre genitalia. Males, for instance, have giant penises. Naturally, they're not on display too often, so few folks are actually aware of this. Recently though an article on the presumable causes underlying this morphology was printed in the New York Times. Forced matings, a.k.a. rape, is common in ducks, so female oviducts seem to have evolved to prevent fertilization occurring during these events. The long phalluses of males are presumably a counter adaptation to the labrythinth like female genitalia. While the sexual selection in Anatid waterfowl is certainly interesting, I was particularly fascinated by this reaction to the article. A NY gossip site put up a blurb on duck dicks, in which some interest was expressed but it was clearly overshadowed by tone of disgust. Actually, I am quite familiar with this type of reaction. Tell "normal" people about something strange in biology and the typical reaction is "ewww, gross". To be honest, this gets a bit tiresome (especially from wise-cracking family members), and it is one reason that I'm reluctant to discuss my work openly. I wonder why this is the case and if this has to be like this. I think part of the problem is that people have an incredible tendency to personify things. Ducks have huge dicks and a third of all matings are males raping females, that's not how it works with people, so this has to be weird and somehow disgusting. I am not saying that these thoughts are conscious, but this type of subconscious logic could definitely be an obstacle to understanding the biological world. I, on the other hand, don't react to "disgusting" biological phenomena like this, but instead I ask why. Why does this look like it does? Why does it operate like that? If there are some reasonable answers to these types of questions, maybe people won't dismiss things as simply gross, but fascinating. So would more scientific education change the way people react to nature? Probably. But would people still react to my parasite stories as disgusting? Yeah, definitely. I just have to accept that the vast majority of the population finds my line of work inherently gross.
Wednesday, May 09, 2007
Well it has been awhile since a proper post. The combination of thesis writing, German learning, financial planning, occasional exercising, and managing immigration beauracracy hasn't left much time for blogging. I came across this today, and found it to be very interesting. Physicists recently described the largest supernova ever observed. Ok, actually, on the surface this is not so exciting. I mean, how can I be excited when I barely understand what a supernova is? Well, what I do know is that stars explode at the end of their life cycles in dramatic, powerful events dubbed supernovas. Normally, the amounts of energy emitted in such events are indescribable to normal, non-physicist minds. For example, a supernova may emit energy which is equivalent to a hundred billion hydrogen bombs or it may emit that equivalent to a hundred trillion H-bombs. Yeah, I get it, they're powerful beyond imagination. However, this article gave a rather innovative example of how powerful this particular explosion actually was. There is a star relatively nearby (7,500 light years, i.e. traveling at the speed of light, we would need 7,500 years to get there) with properties similar to this recently-described, huge supernova. If it were to explode in a similar fashion, the earth would be bathed in near perpetual light. As the article states, we could read comfortably in the middle of the night. The idea of a star exploding in a distant solar system giving the earth constant daylight, is pretty mind-blowing. Makes ya feel kinda small doesn't it?
Saturday, April 28, 2007
I don't laugh out loud very often when reading a band interview, but I had to laugh several times during this interview with HORSE THE BAND. I wonder if anyone can be so crazy or if drugs need to be involved...In other news, I bought the new NIN CD. The CD actually changes color in the heat. Very cool.
Wednesday, April 25, 2007
Honeymoon phase
Today begins a honeymoon phase. I came back to Leipzig from Finland on Monday and Ines returns from Bonn late tonight. We have not seen each other for over a week, which is the longest we’ve been apart since we moved to Leipzig. This time apart was just long enough to ensure that we’ll start a small honeymoon phase tomorrow. What is the honeymoon phase? It is the time in a relationship when things just feel new, good, and exciting, at least that’s my definition. The relationship between Ines and I has been characterized by numerous honeymoon phases. As with most relationships, our first honeymoon phase started shortly after we met in Finland. Because we came from different countries, different cultures, different academic fields, there was always something indescribably fascinating about our time together. Ines was studying intercultural communication at the time, and quickly found the appropriate term to define this state, i.e. honeymoon phase. According to her textbooks, intercultural relationships are often characterized by a honeymoon phase in which both persons find the other interesting and exotic simply because they come from different cultures. Eventually, the honeymoon phase ends and is replaced by more difficult stages in which cultural bridges must be crossed and communication must be more efficient. Naturally, Ines and I both experienced such cultural and/or linguistic difficulties. But on the positive side, we’ve also had many honeymoon phases. This was largely a consequence of us living in two separate countries for about 1.5 years. When we visited each other about every other month, a new honeymoon phase began. During the limited time of each visit, the everyday annoyances could be ignored and we could just enjoy each other. While this may sound tolerable, a long-distance relationship can’t last forever; moving together or breaking up are the two eventual options. Of course, I’m glad that we represent the former. But I’m also happy that there is still the possibility of some short honeymoon phases every now and then. I suppose it is like many other things in life: there needs to be a good balance. In this case, between spending time together and time apart.
Today begins a honeymoon phase. I came back to Leipzig from Finland on Monday and Ines returns from Bonn late tonight. We have not seen each other for over a week, which is the longest we’ve been apart since we moved to Leipzig. This time apart was just long enough to ensure that we’ll start a small honeymoon phase tomorrow. What is the honeymoon phase? It is the time in a relationship when things just feel new, good, and exciting, at least that’s my definition. The relationship between Ines and I has been characterized by numerous honeymoon phases. As with most relationships, our first honeymoon phase started shortly after we met in Finland. Because we came from different countries, different cultures, different academic fields, there was always something indescribably fascinating about our time together. Ines was studying intercultural communication at the time, and quickly found the appropriate term to define this state, i.e. honeymoon phase. According to her textbooks, intercultural relationships are often characterized by a honeymoon phase in which both persons find the other interesting and exotic simply because they come from different cultures. Eventually, the honeymoon phase ends and is replaced by more difficult stages in which cultural bridges must be crossed and communication must be more efficient. Naturally, Ines and I both experienced such cultural and/or linguistic difficulties. But on the positive side, we’ve also had many honeymoon phases. This was largely a consequence of us living in two separate countries for about 1.5 years. When we visited each other about every other month, a new honeymoon phase began. During the limited time of each visit, the everyday annoyances could be ignored and we could just enjoy each other. While this may sound tolerable, a long-distance relationship can’t last forever; moving together or breaking up are the two eventual options. Of course, I’m glad that we represent the former. But I’m also happy that there is still the possibility of some short honeymoon phases every now and then. I suppose it is like many other things in life: there needs to be a good balance. In this case, between spending time together and time apart.
Friday, April 13, 2007
The past few years as I’ve gathered experiences and seen more of the world, I’ve come to support a rather disheartening hypothesis. Economics makes the world go round (not literally, figuratively). I’m of course not the only one of this opinion (stereotypes would suggest all Americans are cold-blooded capitalists), but it does not seem to be an opinion I should hold. After all, I’m a biologist who has never taken a business class or had much interest in money. How did I reach such a conclusion? I guess I just started to notice that many major events, controversies, and conflicts have financial undercurrents. Why did the U.S. win the cold war? More nukes? Hardly. Socialism, in a pure form, just isn’t economically viable, so the Soviet Union collapsed. Interestingly, economics (via high oil prices) is nowadays driving a Russian resurgence in power. What is the source of conflicts in Africa? Groups are fighting for limited resources (Darfur isn’t exactly a farmer’s paradise), not different ideologies. What has fueled China’s rise to near super-power status? Cheap labor fueling an economic explosion. Dido in India. Ok, these are easy examples, and I admit that the idea that “economics drives everything” is a gross oversimplification which ignores a lot of political and moral issues. In any case, I read something the other day that brought this little hypothesis to a much more personal level, and this is what I intended to write when I started this post. The concept of biofuels as an alternative to fossil fuels has been gaining support of late; turning crops into gas should, naturally, put a dent into carbon emissions. Most people, including me, agree that is a good thing. What I didn’t think about, though, are some of the economic repercussion of this. Increasing biofuel production will increase the demand for these crops driving up their price. That’s economics at its simplest. You may be tempted to now think, I’m not a farmer and I’m not keen on vegetables, so who cares? However, one of the crops being used to produce biofuel here in Europe is barley. Barley is, of course, a necessary ingredient in the production of that most important of fermented beverages, beer. Biofuel production increases, demand for barley increases, barley prices increase, beer becomes more expensive to produce, I pay more for a six-pack. What an unforeseen chain of events, at least for me, the economically clueless. But I think this connection between global warming and beer prices may convince some of the people skeptical of my initial hypothesis.
And for those who are curious, Ines won the March Madness pool. My brother and I were so ashamed, but my dad offered warm congrats.
And for those who are curious, Ines won the March Madness pool. My brother and I were so ashamed, but my dad offered warm congrats.
Friday, April 06, 2007
Over the past few months, I've been devoutly learning the German language. While I'm in not at all "good" or even "ok", I can make it through a simple, slow conversation. In any case, my plight has given me a new appreciation of German and any pop cultural references to it. For example, the pop cultural library that is The Simpsons (best show of all time) made what is probably the most clever reference to a German I've ever heard, and I'll reproduce it here to brighten the day. In the episode "When Flanders Failed", Homer is enjoying the failure of Flanders new store, The Leftorium. Lisa, expecting a higher moral standard from her dad, asks “Dad, do you know what Schadenfreude is?”. Homer, ever annoyed by Lisa's judgmental nature, replies sarcastically, “No, I do not know what Schadenfreude is. Please tell me because I’m dying to know.” Lisa then explains “It’s a German word for shameful joy, taking pleasure in the suffering of others.” Homer responds with “Oh, come on, Lisa. I’m just glad to see him fall flat on his butt! He’s usually all happy and comfortable, and surrounded by loved ones, and it makes me feel…what’s the opposite of that shameful joy thing of yours?”
“Sour grapes.”
“Boy, those Germans have a word for everything.”
Homer is sure right about that. Germans do have a word for everything, at least I feel that way learning vocabulary. Too bad sour grapes isn't one of them.
“Sour grapes.”
“Boy, those Germans have a word for everything.”
Homer is sure right about that. Germans do have a word for everything, at least I feel that way learning vocabulary. Too bad sour grapes isn't one of them.
Monday, March 26, 2007
Ok, I don’t want to simply provide yet another update in our little family march madness pool (though I will), so I will present two intriguing moral dilemmas I’ve come across during the past weekend. The first one is presented here, and it deals with the philosophical concept of utilitarianism. It is a very simple moral philosophy: do the actions which bring about the most good for the most people. Seems like it should work pretty well most of the time (c’mon everyone take a piece of the pie!), but there are some counterexamples which show that the theory is not perfect. The classic example is when a morally confused person (i.e. anyone besides religious zealots…they always know what’s right) is confronted with a difficult choice: kill 1 person to save many people. Utilitarianism demands that the unfortunate, innocent person be killed to save the lives of others. People, naturally, have a hard time saying “yeah, no problem, give me the gun and let’s get this ugliness behind us”. It seems our emotions get in the way of cold, hard reason. Take those emotions away, postulated the psychologists and neuroscientists, and you have moral agents acting entirely through reason (I, Robot anyone?). Long story short, this seems to be the scenario in a group of patients with damage in areas of the brain critical for emotional responses. Wild. I find any kind of study that can provide scientific insight into moral questions absolutely astounding. These kinds of questions have been debated for centuries by philosophers, politicians, and religious leaders, but just now are we beginning to understand some of the biological foundations of these issues. Like I said, wild.
The second “dilemma” is for the vegetarians and animal rights activists out there. The American bison, or buffalo, was nearly exterminated by men in the 19th century. At its low point, there were only about 1,000 individuals left; before humans settled N. America the population size was probably in the millions for several thousand years. Nowadays, buffalo numbers are increasing, but not because the great American plains are being restored to prehistoric conditions. Nope, the population is growing because people have developed a taste for buffalo meat. So the moral question thus becomes is it better for a species to go extinct than to be sustained purely for consumption? I got no answer to this one, but I did find it rather intriguing. Maybe it is a good conversation starter for the next vegetarian you meet…
Finally, as promised, the madness update. I was leading our pool through the first 3 rounds of the tournament (from 64 to 8 teams), but then everything went to hell. My predicted champion, Kansas, lost and I ended up only picking 1 of 4 teams in the Final Four (Florida). My dad is now in the lead, and Ines is in second (she picked all 4 teams in the final, unbelievable). I can’t catch either of them. I just have to hope the right teams win, so that I don’t suffer the embarrassment of finishing dead last.
The second “dilemma” is for the vegetarians and animal rights activists out there. The American bison, or buffalo, was nearly exterminated by men in the 19th century. At its low point, there were only about 1,000 individuals left; before humans settled N. America the population size was probably in the millions for several thousand years. Nowadays, buffalo numbers are increasing, but not because the great American plains are being restored to prehistoric conditions. Nope, the population is growing because people have developed a taste for buffalo meat. So the moral question thus becomes is it better for a species to go extinct than to be sustained purely for consumption? I got no answer to this one, but I did find it rather intriguing. Maybe it is a good conversation starter for the next vegetarian you meet…
Finally, as promised, the madness update. I was leading our pool through the first 3 rounds of the tournament (from 64 to 8 teams), but then everything went to hell. My predicted champion, Kansas, lost and I ended up only picking 1 of 4 teams in the Final Four (Florida). My dad is now in the lead, and Ines is in second (she picked all 4 teams in the final, unbelievable). I can’t catch either of them. I just have to hope the right teams win, so that I don’t suffer the embarrassment of finishing dead last.
Wednesday, March 21, 2007
An update on March Madness. After last Sunday, only 16 teams were left (the sweet 16). I picked 11 of 16, including the quasi-cinderella team (UNLV...the runnin rebels!). So, my brackets are probably the best I've had in years. I'm even leading in the family pool! Of course, by writing this, I'll probably jinx myself...so if Kansas loses in this round (I picked them to win it all, foolishly perhaps), I deserve some of the blame. In any case, I'm looking forward to the madness starting up again tomorrow!
Saturday, March 17, 2007

This post is about an American tradition: March Madness. I will refer to wikipedia to define this annual event. I quote “The NCAA Men's Division I Basketball Championship is a single elimination tournament held each spring featuring 65 college basketball teams in the United States. Colloquially known as March Madness (as the tournament takes place mainly during the month of March) or the Big Dance (as opposed to the now smaller and less prestigious NIT), the tournament takes place over 3 weeks at sites across the U.S., and the national semifinals (the Final Four) have become one of the nation's most prominent sports events.” So there be the basics, but why is this tournament considered “Madness”? In my opinion, the number one reason for the “madness” is that the tournament is single elimination. You lose, you go home. There are no round robins, no opportunities to play a bad game. Every year, in true David vs Goliath style, some underdog teams will play above their level and knock out some of the best teams in the country. There are always surprises, and they are always exciting. The madness is exacerbated by the fact that an incredible number of people are betting on this tournament. Actually, this gambling is generally accepted, or at the very least ignored. Here is how this works. Before the tournament, one predicts which teams will win each tournament game. One can then put money into a communal pool (often through work or amongst friends), and at the end of the tournament the person or persons with the best brackets wins the money. The consequence of this is that you start cheering for teams you have never heard of nor cared about. Last night, for instance, I was rooting for Winthrop to beat Notre Dame. I don’t even know where Winthrop is. Total madness. Well, yesterday and the day before were the first two days of the tourney, and 64 teams were reduced to 32 teams. In my pool, which is just for pride and mostly composed of my family (my Dad almost always wins), I am currently in first place. I expect that I won’t stay there for long. There's too much madness yet to pass.
Wednesday, March 14, 2007
From time to time, I check in on the evolution vs. creationism debate. I'm not really sure why. Perhaps, I keep expecting creationists to "see the light", and realize that evolution is the best scientific explanation we have for the biological diversity and phenomena we observe today. Anyone that disregards evolution is ignoring over 100 years of scientific work...which is fine, just be willing to acknowledge that and say that your beliefs are entirely faith-based. I really hate it when people try to mash together a literal interpretation of the bible and scientific reality. Here is a awful example of this from youtube. It seems that some people are convinced that dinosaurs and people co-existed at sometime. Unbelievably, this video has been "favorited" over 100 times. I only managed to listen to this guy for 5 mins, much more and I may have jammed a pen in my ear to dull the pain.
Sunday, March 04, 2007


The lazy blogger
We had a party last night, so I’m not in the best condition today. Thus, instead of trying to write something interesting myself, I’m going to direct you to some cool posts on other blogs. The first is here and is about the capture of an adult colossal squid. Basically it just shows some amazing pictures, so it is good for lazy blog patrons. I’ve added a picture showing the hooks that this beast has in its tentacle suckers, and one showing what these hooks probably do to spermwhales making a meal out of these squids. What an amazing animal; a testament to out vast ignorance of what lives down in the deep oceans. The second post can be found here. It is about some of my favorite critters: parasitic worms. A new molecular phylogeny of the platyhelminthes (flatworms) has been published. Phylogenies are hypotheses about the relationships between species, and they are often built using DNA data. Here the goal was to examine the deep evolution of parasitic worms, i.e. how they evoled a parasitic life style, how they added hosts to their life cycle, and how they radiated in a staggering variety of animal hosts. For lay persons, the post gives an interesting overview of the natural history of these fascinating animals. For parasitologists, there is a surprise at the end of the post…in the re-printed phylogeny, it seems the trematodes, a huge group of parasites, are not monophyletic. I’m guessing it is due to the limited sampling of species in the study, not biological reality, but I will have to actually look up that paper to see if this is how the results were interpreted. I also recommend following the link about the discovery of tapeworm life cycles. Apparently, tapeworms were discovered by a German doctor with the name Kuchenmeister (literal translation: cake master). Good that he didn’t take up the family profession…
We had a party last night, so I’m not in the best condition today. Thus, instead of trying to write something interesting myself, I’m going to direct you to some cool posts on other blogs. The first is here and is about the capture of an adult colossal squid. Basically it just shows some amazing pictures, so it is good for lazy blog patrons. I’ve added a picture showing the hooks that this beast has in its tentacle suckers, and one showing what these hooks probably do to spermwhales making a meal out of these squids. What an amazing animal; a testament to out vast ignorance of what lives down in the deep oceans. The second post can be found here. It is about some of my favorite critters: parasitic worms. A new molecular phylogeny of the platyhelminthes (flatworms) has been published. Phylogenies are hypotheses about the relationships between species, and they are often built using DNA data. Here the goal was to examine the deep evolution of parasitic worms, i.e. how they evoled a parasitic life style, how they added hosts to their life cycle, and how they radiated in a staggering variety of animal hosts. For lay persons, the post gives an interesting overview of the natural history of these fascinating animals. For parasitologists, there is a surprise at the end of the post…in the re-printed phylogeny, it seems the trematodes, a huge group of parasites, are not monophyletic. I’m guessing it is due to the limited sampling of species in the study, not biological reality, but I will have to actually look up that paper to see if this is how the results were interpreted. I also recommend following the link about the discovery of tapeworm life cycles. Apparently, tapeworms were discovered by a German doctor with the name Kuchenmeister (literal translation: cake master). Good that he didn’t take up the family profession…
Monday, February 26, 2007
I was initially very suspicious about Wikipedia. I mean how well could "internet users" write an encyclopedia, a compilation of tedious academic documents? Actually, after some reports suggested the Wiki entries are approximately as good as actual encylopedias, I started using Wikipedia. Quite frankly, I've become a believer. Wikipedia is a very useful resource. Now people can forget about the validity of the site and start debating new issues such as entry relevancy. Check this out if you are bored. I found it slightly entertaining...
Wednesday, February 21, 2007

Wormy world
This blog is titled “parasitesandrocknroll”, but it has been awhile since either parasites or rock n roll has been the topic of a post. Well, there was a bit about R n R in the last post (i.e. nine inch nails). Anyways, it is definitely time for a post about parasites! Most people think that maintaining biodiversity is a good thing. We tend to feel bad when things go extinct, with the exception of dangerous diseases like smallpox. Cute or furry animals are especially high on the conservation list. However, if we want to conserve biodiversity as a general goal, regardless of the creature’s charisma, we would more or less be protecting parasites (and by extension their hosts). Parasites easily outnumber free-living species. That can serve as a nice anecdote at your next dinner party…”by the way, did you know that there are more parasitic animals than free-living animals?”. It may impress your friends, though it would probably kill most conversations. Anyhow, let me provide some evidence to back up this claim. Traditionally, species have been determined by noting and describing clear morphological differences between them. Sounds easy, but this can be exceedingly difficult when looking at 2 mm long worms. Nowadays, though, it is relatively cheap and easy to sequence a critter’s DNA and assess whether there is gene flow between different morphotypes (critter’s that look different). Broadly, if there isn’t any evidence of gene mixing, you can be rather sure you have different species. I have two friends/colleagues that work in parasite systematics that have used this approach. The first I knew in Nebraska and examined a particular parasite that had been found in many different fish species…suggestive that it is actually many parasite species. Well, after looking at the DNA, there turned out to be 5 or 6 new, previously unrecognized species. The other friend worked on tropical fish (snappers (pic) check ‘em out) from the Great Barrier Reef. Same story. He examined an understudied group of parasites both morphologically and molecularly, and turned up 11 new species. These stories are definitely not unusual. Parasite species diversity is just grossly underestimated. Think about it this way. There are about 40,000 described species of fish. Each fish species will probably have a few unique parasite species; some will harbor an incredible diversity of parasites. For example, in one fish species in one lake, there may be more than 40 different parasite species capable of infecting it. So how many parasites are there? No one knows, but we can be sure that most animals on this earth are parasites. Indeed, we live in a very wormy world.
This blog is titled “parasitesandrocknroll”, but it has been awhile since either parasites or rock n roll has been the topic of a post. Well, there was a bit about R n R in the last post (i.e. nine inch nails). Anyways, it is definitely time for a post about parasites! Most people think that maintaining biodiversity is a good thing. We tend to feel bad when things go extinct, with the exception of dangerous diseases like smallpox. Cute or furry animals are especially high on the conservation list. However, if we want to conserve biodiversity as a general goal, regardless of the creature’s charisma, we would more or less be protecting parasites (and by extension their hosts). Parasites easily outnumber free-living species. That can serve as a nice anecdote at your next dinner party…”by the way, did you know that there are more parasitic animals than free-living animals?”. It may impress your friends, though it would probably kill most conversations. Anyhow, let me provide some evidence to back up this claim. Traditionally, species have been determined by noting and describing clear morphological differences between them. Sounds easy, but this can be exceedingly difficult when looking at 2 mm long worms. Nowadays, though, it is relatively cheap and easy to sequence a critter’s DNA and assess whether there is gene flow between different morphotypes (critter’s that look different). Broadly, if there isn’t any evidence of gene mixing, you can be rather sure you have different species. I have two friends/colleagues that work in parasite systematics that have used this approach. The first I knew in Nebraska and examined a particular parasite that had been found in many different fish species…suggestive that it is actually many parasite species. Well, after looking at the DNA, there turned out to be 5 or 6 new, previously unrecognized species. The other friend worked on tropical fish (snappers (pic) check ‘em out) from the Great Barrier Reef. Same story. He examined an understudied group of parasites both morphologically and molecularly, and turned up 11 new species. These stories are definitely not unusual. Parasite species diversity is just grossly underestimated. Think about it this way. There are about 40,000 described species of fish. Each fish species will probably have a few unique parasite species; some will harbor an incredible diversity of parasites. For example, in one fish species in one lake, there may be more than 40 different parasite species capable of infecting it. So how many parasites are there? No one knows, but we can be sure that most animals on this earth are parasites. Indeed, we live in a very wormy world.
Sunday, February 18, 2007
Miscellaneous
To follow up on the last post, it seems that the readership of this blog is rather limited. So if nobody reads this, I can treat this blog as a kind of lonely throne, from which I can espouse any kind of vulgary that I please. I could say the most offensive thing in the world without reprisal!! But then, the question arises, what is the most offensive thing in the world? I suppose everyone could come up with some revolting, yet slightly entertaining, idea. Just think about it…
I titled this blog “Misc.”, so to continue with that theme, I’ll move on to a completely unrelated topic: Trent Reznor is an evil genius. I was never a big nine inch nails fan, but I respected and enjoyed some of their music. Well, I have a new found admiration of Reznor’s genius, the brain behind the band. The marketing campaign for NIN’s new album, dubbed “Year Zero”, is absolutely brilliant. First, at recent live shows, fans “found” USB drives in the venue’s bathrooms. On the drives was a new track from the NIN album, and, of course, it quickly circulated around the internet. What a clever and cheap marketing campaign; no need for you Myspace. Even more scary brilliant, though, is this aspect of the marketing. Apparently, on t-shirts sold at the concerts, there is a scrambled message that leads to a particular website describing a government conspiracy to poison the drinking water. The conspiracy deepens from there. There are a whole series of connected websites which present a grim picture of the near future: no civil liberties, a brutal church state, holy war. While the owners of the website nor the label would give away any information about relations between the sites and NIN, Reznor released a brief yet tantalizing statement about the concept behind the new album. Check it out and feel free to get sucked into the conspiracy. It is hard not to admire the unbelievable creativity underlying all this.
Finally, to add to the miscellaneousity (not a word) of this post, I found this article very interesting. It seems that the emotion of sympathy is strongest when associated with a single case or person. That intuitively makes sense; a murder or missing person case of a single, high profile or beautiful person usually makes more news that the multiple larger-scale atrocities going on around the world. To quote a Marilyn Manson song, “The death of one is a tragedy”. So we can strongly sympathize with a single person, yet our feelings don’t scale up to higher numbers. The visceral reaction from the death of 10,000 people or 100,000 people doesn’t really differ. Since I’m a scientist, I’m used to looking at numbers and letting them largely determine my conclusions. So 3,000 Americans have died in Iraq, well over 200,000 thousand have died in Darfur. Shouldn’t I consider Darfur a bigger tragedy worthy of more attention? I think this research suggests that these kinds of questions are not valid. For whatever reason, human emotions are not governed by numbers, so you just can’t rank tragedies. Well, I suppose the conclusion here is that morality issues are incredibly difficult.
To follow up on the last post, it seems that the readership of this blog is rather limited. So if nobody reads this, I can treat this blog as a kind of lonely throne, from which I can espouse any kind of vulgary that I please. I could say the most offensive thing in the world without reprisal!! But then, the question arises, what is the most offensive thing in the world? I suppose everyone could come up with some revolting, yet slightly entertaining, idea. Just think about it…
I titled this blog “Misc.”, so to continue with that theme, I’ll move on to a completely unrelated topic: Trent Reznor is an evil genius. I was never a big nine inch nails fan, but I respected and enjoyed some of their music. Well, I have a new found admiration of Reznor’s genius, the brain behind the band. The marketing campaign for NIN’s new album, dubbed “Year Zero”, is absolutely brilliant. First, at recent live shows, fans “found” USB drives in the venue’s bathrooms. On the drives was a new track from the NIN album, and, of course, it quickly circulated around the internet. What a clever and cheap marketing campaign; no need for you Myspace. Even more scary brilliant, though, is this aspect of the marketing. Apparently, on t-shirts sold at the concerts, there is a scrambled message that leads to a particular website describing a government conspiracy to poison the drinking water. The conspiracy deepens from there. There are a whole series of connected websites which present a grim picture of the near future: no civil liberties, a brutal church state, holy war. While the owners of the website nor the label would give away any information about relations between the sites and NIN, Reznor released a brief yet tantalizing statement about the concept behind the new album. Check it out and feel free to get sucked into the conspiracy. It is hard not to admire the unbelievable creativity underlying all this.
Finally, to add to the miscellaneousity (not a word) of this post, I found this article very interesting. It seems that the emotion of sympathy is strongest when associated with a single case or person. That intuitively makes sense; a murder or missing person case of a single, high profile or beautiful person usually makes more news that the multiple larger-scale atrocities going on around the world. To quote a Marilyn Manson song, “The death of one is a tragedy”. So we can strongly sympathize with a single person, yet our feelings don’t scale up to higher numbers. The visceral reaction from the death of 10,000 people or 100,000 people doesn’t really differ. Since I’m a scientist, I’m used to looking at numbers and letting them largely determine my conclusions. So 3,000 Americans have died in Iraq, well over 200,000 thousand have died in Darfur. Shouldn’t I consider Darfur a bigger tragedy worthy of more attention? I think this research suggests that these kinds of questions are not valid. For whatever reason, human emotions are not governed by numbers, so you just can’t rank tragedies. Well, I suppose the conclusion here is that morality issues are incredibly difficult.
Sunday, February 11, 2007
Death to the blog
There has been a serious decline in the number of comments on the blog (even those of the perverse and anonymous sort). From time to time, in my more depressive moments, I wonder about the reasons for this trend. Is there no one reading? Are the musings posted here so irrelevant they elicit no response? Did this blog already become dull and uncool? You may be saying to yourself, “c’mon man, the blog was never cool”, and you’d be right. I acknowledge this. What I am hoping, though, is that the blog can maintain a neutral level of coolness, not being described as “lame” nor “bitchin”. Is that too lofty a goal? To be average? I, like so many of us, need reassurance that my aspirations are being achieved, at least a little. Thus, the occasional comment from any devoted readers will reassure me that the blog is at least “average”, and it will keep me from falling into a deep depression induced by blog failure. So to elicit some comments, I present a topic and some examples. Here we go: Ideas that seem good while intoxicated…
-using any pickup line ever conceived
-speaking another language
-calling all the phone numbers in your mobile
-singing karaoke
-singing to your girl- or boyfriend
-opening that bottle of vodka
-quitting your job to become a freelance artist
-writing an animated novel
-starting a pet store
-loaning money to a friend so s/he can start a pet store
-stealing signs or any other kind of petty vandalism
-making pancakes
-sledding
-starting a blog
I’m sure there are plenty of other “good” ideas that are had when inebriated. Please enlighten me and other readers by posting them. And if you can’t think of anything at the moment, perhaps you aren’t in the right state of mind. That’s easily ameliorated though…cheers!
There has been a serious decline in the number of comments on the blog (even those of the perverse and anonymous sort). From time to time, in my more depressive moments, I wonder about the reasons for this trend. Is there no one reading? Are the musings posted here so irrelevant they elicit no response? Did this blog already become dull and uncool? You may be saying to yourself, “c’mon man, the blog was never cool”, and you’d be right. I acknowledge this. What I am hoping, though, is that the blog can maintain a neutral level of coolness, not being described as “lame” nor “bitchin”. Is that too lofty a goal? To be average? I, like so many of us, need reassurance that my aspirations are being achieved, at least a little. Thus, the occasional comment from any devoted readers will reassure me that the blog is at least “average”, and it will keep me from falling into a deep depression induced by blog failure. So to elicit some comments, I present a topic and some examples. Here we go: Ideas that seem good while intoxicated…
-using any pickup line ever conceived
-speaking another language
-calling all the phone numbers in your mobile
-singing karaoke
-singing to your girl- or boyfriend
-opening that bottle of vodka
-quitting your job to become a freelance artist
-writing an animated novel
-starting a pet store
-loaning money to a friend so s/he can start a pet store
-stealing signs or any other kind of petty vandalism
-making pancakes
-sledding
-starting a blog
I’m sure there are plenty of other “good” ideas that are had when inebriated. Please enlighten me and other readers by posting them. And if you can’t think of anything at the moment, perhaps you aren’t in the right state of mind. That’s easily ameliorated though…cheers!
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